Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015850347.1_cds_XP_016511134.1_23906
CDS Infomation

[gene=LOC107828358] [db_xref=GeneID:107828358] [protein=uncharacterized protein LOC107828358 isoform X3] [protein_id=XP_016511134.1] [location=join(52577..52686,53384..53550,54052..54124,54850..54997,55985..56094,56215..56355,56452..56593,56670..56813,59212..59363,59516..59590,59754..59892,69131..69400,69842..69988)] [gbkey=CDS]
Sequence

ATGAAGCAAAGGGCCCTAGTTGGAGCTGGATTGCTTATAAGATTCTCAAGACTTGCATTG
CTTATTCATCTGGAGTTACCTCCGCTATTCTCCTCTCCGATCTCTTTCAGGAGTGGAGCT
CCAAAGAAACAGTCAGAATGTATTAGTCACATGAAGAAGAAGCATAAGAGGGCAAAGCTT
CCTAACACTGTCACCATTGACTCTATATATGAGAAAAAGTTCTTATCTTTGAACAGTGTA
ATTGAAGCTGTCATTATAGACACTTTCATTCTTCCAGGAACAAACATTTATATGCTTCAT
CTGGGTGATTTTTGGAGTTCTAATACAATAGATCTGTATCTTCACCGTAGATTCTACAGC
TTAGCTGATCCAAAGAATGGTATTTTGAAGAAAGGTCGTGAAGTTTTCCTCACAGGGTGC
CGCCTCCGAACTGCCACTGGATGTTCAGGTCATGCACGGCTTTTGCCAACTGAATATCTT
GTGATACTGTTAGATGAGGACCAAGATGATGATGCAATGTTGCTTTTAGCACGATTTTGT
GCAGATTCCTTCTCTTCCATTTCTCTTGGTACAGTCGATCAGGGGGTCTCCTATTCATTA
CGTGCAAGGATTGAATCTATTACTTCTCCGGAGGTTCAAGGGAAGTATGGTAGTTTGCAG
AGGAAGCAAATTAATCTTGTTGATTATGATGGTGTCAGTTCAAAATTTCTTTTGTGGGGT
GAGCAGGTTCTGCTTGCAAACCTATTCAGCGTGGGAAGTACGCTTGCCCTGGATAGACCA
TTTATTTTGAGTTCCACTGAGAGTGCTCTTGAATTATCTGAAGAATTTTGCCTTGAATAC
GGTACTGCAACACAGTTATATCTGGTGCCTTTTATTCGGCATGAGGAGCAAGTATCCGTA
GCATTGACTCAGAACCATCATAAAGGGTCAAAACTATCAAGAGCTATGGATCCAAGTCAG
GGACTTGTAGTCTCCCAGGTTTCCCTGCCTTGTAATTCTCAAGGTTCTATTGACTTCAGT
AATTATCCTTTCCGATCATTTGTTATTGATCTTCGGGAGAAGATGACCGGAGTAAGCCTC
TATGGTATTGTTGCTGACATCAGAAGTACTCAAGAGCCAGTATTTTCTGTTAAGATTCAA
GATGTAACTGGTGCAGTTTGGGCGAGACTACATTTTGCTCGATCCTGGTCATTAGGGATA
CTAGGACTGGGGCATAGTATTTACATATCTGGTTTGGCGTGCTCTATGGGGACAAGAAAA
AGCCTAGAACTGCGGTGGTTCGAGAATGATGTTGGAGCTTCATTTATTAATATTAGTTGC
TTACCAGCACTGCTTAACTCATCTTGTCTTCACAAGTTATCCTGCCTTTCTGATTTATCA
GTGGAGTCTACTGGTACCCGTGTATGTCGAGTCTGGCTGGATCAAATTGAGCATTGTCAC
GTGACTACGAGACTATCACATACGTCTTGTGGTTATTTTCTTGATGATAGTTCCATTGAG
GATCTCAAGTGCAGCTTCTGTCAATGTAAATGCAATGCAGAACTGGCATGGAATTTCCAT
TTAAAAATAACTCTTGCAGATGAGAGTGGAAAAATCTTTGCCTGGTGTACTGGTCAAACT
GCCGTGGAGTTGCTGCAAATAGCTCCTGATGAATTCTGCGAACTACCAGAGGAAGAGCAG
ATAATGTATCCATCATCCCTTGAGCACGAAACATTCAAAGTTGCATTGGTGAACTGCAGG
AAAAAGGTTGAAGGACTTATGGATCAAGATCATGACACAGTCGAATGGGAAATCACCCGT
GCAATGAAGTGGGAATAA

Peptide Sequence

PEP ID

XP_016511134.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107828358 isoform X3 [Nicotiana tabacum]
Sequence

MKQRALVGAGLLIRFSRLALLIHLELPPLFSSPISFRSGAPKKQSECISHMKKKHKRAKL
PNTVTIDSIYEKKFLSLNSVIEAVIIDTFILPGTNIYMLHLGDFWSSNTIDLYLHRRFYS
LADPKNGILKKGREVFLTGCRLRTATGCSGHARLLPTEYLVILLDEDQDDDAMLLLARFC
ADSFSSISLGTVDQGVSYSLRARIESITSPEVQGKYGSLQRKQINLVDYDGVSSKFLLWG
EQVLLANLFSVGSTLALDRPFILSSTESALELSEEFCLEYGTATQLYLVPFIRHEEQVSV
ALTQNHHKGSKLSRAMDPSQGLVVSQVSLPCNSQGSIDFSNYPFRSFVIDLREKMTGVSL
YGIVADIRSTQEPVFSVKIQDVTGAVWARLHFARSWSLGILGLGHSIYISGLACSMGTRK
SLELRWFENDVGASFINISCLPALLNSSCLHKLSCLSDLSVESTGTRVCRVWLDQIEHCH
VTTRLSHTSCGYFLDDSSIEDLKCSFCQCKCNAELAWNFHLKITLADESGKIFAWCTGQT
AVELLQIAPDEFCELPEEEQIMYPSSLEHETFKVALVNCRKKVEGLMDQDHDTVEWEITR
AMKWE

Transcript Sequence

Gene sequence data has not been registered.